IL_7MSC_061

3D structure

PDB id

7MSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

CGGUAG*UGAGAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSC_061 not in the Motif Atlas

Geometric match to IL_7A0S_027

Geometric discrepancy: 0.3485

The information below is about IL_7A0S_027

Detailed Annotation

5x5 Sarcin-Ricin with intercalated A; G-bulge

Broad Annotation

Sarcin-Ricin; G-bulge

Motif group

IL_81631.1

Basepair signature

cWW-L-R-cSH-R-R-L-R-cWW

Number of instances in this motif group

2

Unit IDs

7MSC|1|A|C|1711
7MSC|1|A|G|1712
7MSC|1|A|G|1713
7MSC|1|A|U|1714
7MSC|1|A|A|1715
7MSC|1|A|G|1716
*
7MSC|1|A|U|1752
7MSC|1|A|G|1753
7MSC|1|A|A|1754
7MSC|1|A|G|1755
7MSC|1|A|A|1756
7MSC|1|A|G|1757

Current chains

Chain A

23S rRNA

Nearby chains