IL_7MSC_098

3D structure

PDB id

7MSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

CUC*GCGAG

Length

8 nucleotides

Bulged bases

7MSC|1|A|G|2814, 7MSC|1|A|A|2815

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSC_098 not in the Motif Atlas

Homologous match to IL_7RQB_097

Geometric discrepancy: 0.1106

The information below is about IL_7RQB_097

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_90933.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

11

Unit IDs

7MSC|1|A|C|2748
7MSC|1|A|U|2749
7MSC|1|A|C|2750
*
7MSC|1|A|G|2812
7MSC|1|A|C|2813
7MSC|1|A|G|2814
7MSC|1|A|A|2815
7MSC|1|A|G|2816

Current chains

Chain A

23S rRNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3