IL_7MSC_169

3D structure

PDB id

7MSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

CAGC*GG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSC_169 not in the Motif Atlas

Geometric match to IL_5J7L_052

Geometric discrepancy: 0.2059

The information below is about IL_5J7L_052

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_15052.4

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

8

Unit IDs

7MSC|1|a|C|1120
7MSC|1|a|A|1121
7MSC|1|a|G|1122
7MSC|1|a|C|1123
*
7MSC|1|a|G|1134
7MSC|1|a|G|1135

Current chains

Chain a

16S rRNA

Nearby chains

Chain i

30S ribosomal protein S9

Chain j

30S ribosomal protein S10