IL_7MSC_178

3D structure

PDB id

7MSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

CAC*GAAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSC_178 not in the Motif Atlas

Geometric match to IL_5VCI_005

Geometric discrepancy: 0.2664

The information below is about IL_5VCI_005

Detailed Annotation

Not an internal loop

Broad Annotation

Not an internal loop

Motif group

IL_64417.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

18

Unit IDs

7MSC|1|a|C|1400
7MSC|1|a|A|1401
7MSC|1|a|C|1402
*
7MSC|1|a|G|1484
7MSC|1|a|A|1485
7MSC|1|a|A|1486
7MSC|1|a|G|1487

Current chains

Chain a

16S rRNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain l

30S ribosomal protein S12

Chain z

mRNA