IL_7MSH_040

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CUAAGUG*CUCAAG

Length

13 nucleotides

Bulged bases

7MSH|1|A|C|1271, 7MSH|1|A|A|1273

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSH_040 not in the Motif Atlas

Homologous match to IL_7RQB_039

Geometric discrepancy: 0.1484

The information below is about IL_7RQB_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_57188.3

Basepair signature

cWW-cSH-tWW-L-tWW-cWW-cSH

Number of instances in this motif group

5

Unit IDs

7MSH|1|A|C|1147
7MSH|1|A|U|1148
7MSH|1|A|A|1149
7MSH|1|A|A|1150
7MSH|1|A|G|1151
7MSH|1|A|U|1152
7MSH|1|A|G|1153
*
7MSH|1|A|C|1269
7MSH|1|A|U|1270
7MSH|1|A|C|1271
7MSH|1|A|A|1272
7MSH|1|A|A|1273
7MSH|1|A|G|1274

Current chains

Chain A

23S rRNA

Nearby chains

Chain 4

50S ribosomal protein L36

Chain G

50S ribosomal protein L6

Chain J

50S ribosomal protein L13