IL_7MSH_086

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

UGA*UG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSH_086 not in the Motif Atlas

Homologous match to IL_4WF9_091

Geometric discrepancy: 0.125

The information below is about IL_4WF9_091

Detailed Annotation

Major groove platform

Broad Annotation

No text annotation

Motif group

IL_48076.9

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

44

Unit IDs

7MSH|1|A|U|2695
7MSH|1|A|G|2696
7MSH|1|A|A|2697
*
7MSH|1|A|U|2731
7MSH|1|A|G|2732

Current chains

Chain A

23S rRNA

Nearby chains

Chain 7

50S ribosomal protein L37

Chain M

50S ribosomal protein L16