IL_7MSH_103

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

UGGAAG*UGUAG

Length

11 nucleotides

Bulged bases

7MSH|1|A|U|3102

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSH_103 not in the Motif Atlas

Homologous match to IL_7A0S_101

Geometric discrepancy: 0.206

The information below is about IL_7A0S_101

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_48489.2

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

9

Unit IDs

7MSH|1|A|U|3082
7MSH|1|A|G|3083
7MSH|1|A|G|3084
7MSH|1|A|A|3085
7MSH|1|A|A|3086
7MSH|1|A|G|3087
*
7MSH|1|A|U|3100
7MSH|1|A|G|3101
7MSH|1|A|U|3102
7MSH|1|A|A|3103
7MSH|1|A|G|3104

Current chains

Chain A

23S rRNA

Nearby chains

Chain N

50S ribosomal protein L17

Chain P

50S ribosomal protein L19