IL_7MSH_146

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

UGA*UACA

Length

7 nucleotides

Bulged bases

7MSH|1|a|A|1387

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSH_146 not in the Motif Atlas

Geometric match to IL_5TBW_016

Geometric discrepancy: 0.3213

The information below is about IL_5TBW_016

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

7MSH|1|a|U|914
7MSH|1|a|G|915
7MSH|1|a|A|916
*
7MSH|1|a|U|1386
7MSH|1|a|A|1387
7MSH|1|a|C|1388
7MSH|1|a|A|1389

Current chains

Chain a

16S rRNA

Nearby chains

Chain e

30S ribosomal protein S5