IL_7MSH_161

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CAGCAC*GUGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSH_161 not in the Motif Atlas

Homologous match to IL_6CZR_159

Geometric discrepancy: 0.3727

The information below is about IL_6CZR_159

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MSH|1|a|C|1120
7MSH|1|a|A|1121
7MSH|1|a|G|1122
7MSH|1|a|C|1123
7MSH|1|a|A|1124
7MSH|1|a|C|1125
*
7MSH|1|a|G|1132
7MSH|1|a|U|1133
7MSH|1|a|G|1134
7MSH|1|a|G|1135

Current chains

Chain a

16S rRNA

Nearby chains

Chain i

30S ribosomal protein S9