IL_7MSH_183

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

GUGAAG*UGGAGGC

Length

13 nucleotides

Bulged bases

7MSH|1|A|G|858

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSH_183 not in the Motif Atlas

Geometric match to IL_4V88_462

Geometric discrepancy: 0.2418

The information below is about IL_4V88_462

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_82488.1

Basepair signature

cWW-tSH-tSH-tHS-cWW-cWW

Number of instances in this motif group

7

Unit IDs

7MSH|1|A|G|831
7MSH|1|A|U|832
7MSH|1|A|G|833
7MSH|1|A|A|834
7MSH|1|A|A|835
7MSH|1|A|G|836
*
7MSH|1|A|U|853
7MSH|1|A|G|854
7MSH|1|A|G|855
7MSH|1|A|A|856
7MSH|1|A|G|857
7MSH|1|A|G|858
7MSH|1|A|C|859

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2