IL_7MSH_205

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

GGGAAACG*CUAAGCC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSH_205 not in the Motif Atlas

Geometric match to IL_4WF9_113

Geometric discrepancy: 0.1746

The information below is about IL_4WF9_113

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01750.1

Basepair signature

cWW-cWW-L-cSW-L-cSW-L-R-cWW-cWW

Number of instances in this motif group

2

Unit IDs

7MSH|1|B|G|21
7MSH|1|B|G|22
7MSH|1|B|G|23
7MSH|1|B|A|24
7MSH|1|B|A|25
7MSH|1|B|A|26
7MSH|1|B|C|27
7MSH|1|B|G|28
*
7MSH|1|B|C|54
7MSH|1|B|U|55
7MSH|1|B|A|56
7MSH|1|B|A|57
7MSH|1|B|G|58
7MSH|1|B|C|59
7MSH|1|B|C|60

Current chains

Chain B

5S rRNA

Nearby chains

Chain F

50S ribosomal protein L5

Chain O

50S ribosomal protein L18