IL_7MSH_227
3D structure
- PDB id
- 7MSH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mtb 70SIC in complex with MtbEttA at Pre_R1 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- UAACA*UGGGA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MSH_227 not in the Motif Atlas
- Geometric match to IL_8D29_010
- Geometric discrepancy: 0.2209
- The information below is about IL_8D29_010
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_71154.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 18
Unit IDs
7MSH|1|a|U|1417
7MSH|1|a|A|1418
7MSH|1|a|A|1419
7MSH|1|a|C|1420
7MSH|1|a|A|1421
*
7MSH|1|a|U|1465
7MSH|1|a|G|1466
7MSH|1|a|G|1467
7MSH|1|a|G|1468
7MSH|1|a|A|1469
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain K
- 50S ribosomal protein L14
Coloring options: