IL_7MT2_015

3D structure

PDB id

7MT2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

GUAC*GAGUGAAAGAGUAC

Length

18 nucleotides

Bulged bases

7MT2|1|A|G|592, 7MT2|1|A|A|596

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MT2_015 not in the Motif Atlas

Geometric match to IL_5TBW_014

Geometric discrepancy: 0.1136

The information below is about IL_5TBW_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_60992.7

Basepair signature

cWW-cWS-tSH-L-tHH-tWH-cWW-tSS-tSH-L-L

Number of instances in this motif group

6

Unit IDs

7MT2|1|A|G|570
7MT2|1|A|U|571
7MT2|1|A|A|572
7MT2|1|A|C|573
*
7MT2|1|A|G|584
7MT2|1|A|A|585
7MT2|1|A|G|586
7MT2|1|A|U|587
7MT2|1|A|G|588
7MT2|1|A|A|589
7MT2|1|A|A|590
7MT2|1|A|A|591
7MT2|1|A|G|592
7MT2|1|A|A|593
7MT2|1|A|G|594
7MT2|1|A|U|595
7MT2|1|A|A|596
7MT2|1|A|C|597

Current chains

Chain A

23S rRNA

Nearby chains

Chain S

50S ribosomal protein L22

Chain U

50S ribosomal protein L24