IL_7MT2_195

3D structure

PDB id

7MT2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

UUAAG*UUAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MT2_195 not in the Motif Atlas

Homologous match to IL_9DFE_074

Geometric discrepancy: 0.1937

The information below is about IL_9DFE_074

Detailed Annotation

UAA/GAN with extra stack

Broad Annotation

UAA/GAN with extra stack

Motif group

IL_89021.4

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

8

Unit IDs

7MT2|1|A|U|2085
7MT2|1|A|U|2086
7MT2|1|A|A|2087
7MT2|1|A|A|2088
7MT2|1|A|G|2089
*
7MT2|1|A|U|2125
7MT2|1|A|U|2126
7MT2|1|A|A|2127
7MT2|1|A|A|2128
7MT2|1|A|G|2129

Current chains

Chain A

23S rRNA

Nearby chains