3D structure

PDB id
7MT3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mtb 70S with P/E tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
2.8 Å

Loop

Sequence
AUC*GGUUU
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7MT3_092 not in the Motif Atlas
Geometric match to IL_7RQB_094
Geometric discrepancy: 0.1556
The information below is about IL_7RQB_094
Detailed Annotation
Major groove minor groove platform with extra cWW
Broad Annotation
Major groove minor groove platform; mini C-loop
Motif group
IL_92788.2
Basepair signature
cWW-L-R-L-cWW-L
Number of instances in this motif group
14

Unit IDs

7MT3|1|A|A|2697
7MT3|1|A|U|2698
7MT3|1|A|C|2699
*
7MT3|1|A|G|2727
7MT3|1|A|G|2728
7MT3|1|A|U|2729
7MT3|1|A|U|2730
7MT3|1|A|U|2731

Current chains

Chain A
23S rRNA

Nearby chains

Chain 7
50S ribosomal protein L37
Chain M
50S ribosomal protein L16

Coloring options:


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