IL_7MT3_129

3D structure

PDB id

7MT3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70S with P/E tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGAUGACG*UGUAAAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MT3_129 not in the Motif Atlas

Homologous match to IL_5J7L_020

Geometric discrepancy: 0.3694

The information below is about IL_5J7L_020

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28026.3

Basepair signature

cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW

Number of instances in this motif group

2

Unit IDs

7MT3|1|a|G|408
7MT3|1|a|G|409
7MT3|1|a|A|410
7MT3|1|a|U|411
7MT3|1|a|G|412
7MT3|1|a|A|413
7MT3|1|a|C|414
7MT3|1|a|G|415
*
7MT3|1|a|U|426
7MT3|1|a|G|427
7MT3|1|a|U|428
7MT3|1|a|A|429
7MT3|1|a|A|430
7MT3|1|a|A|431
7MT3|1|a|C|432

Current chains

Chain a

16S rRNA

Nearby chains

Chain d

30S ribosomal protein S4