3D structure

PDB id
7MT3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mtb 70S with P/E tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
2.8 Å

Loop

Sequence
CGACG*CGGUAG
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7MT3_131 not in the Motif Atlas
Homologous match to IL_4LFB_018
Geometric discrepancy: 0.1331
The information below is about IL_4LFB_018
Detailed Annotation
6x5 Sarcin-Ricin; G-bulge
Broad Annotation
Sarcin-Ricin; G-bulge
Motif group
IL_88269.4
Basepair signature
cWW-tWW-cSH-tWH-tHS-cWW
Number of instances in this motif group
3

Unit IDs

7MT3|1|a|C|445
7MT3|1|a|G|446
7MT3|1|a|A|447
7MT3|1|a|C|448
7MT3|1|a|G|449
*
7MT3|1|a|C|474
7MT3|1|a|G|475
7MT3|1|a|G|476
7MT3|1|a|U|477
7MT3|1|a|A|478
7MT3|1|a|G|479

Current chains

Chain a
16S rRNA

Nearby chains

Chain d
30S ribosomal protein S4
Chain p
30S ribosomal protein S16

Coloring options:


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