3D structure

PDB id
7MT3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mtb 70S with P/E tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
2.8 Å

Loop

Sequence
UG*CAA
Length
5 nucleotides
Bulged bases
7MT3|1|a|A|1188
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7MT3_161 not in the Motif Atlas
Geometric match to IL_5J7L_049
Geometric discrepancy: 0.1831
The information below is about IL_5J7L_049
Detailed Annotation
Single bulged A
Broad Annotation
No text annotation
Motif group
IL_31462.7
Basepair signature
cWW-L-cWW
Number of instances in this motif group
132

Unit IDs

7MT3|1|a|U|1051
7MT3|1|a|G|1052
*
7MT3|1|a|C|1187
7MT3|1|a|A|1188
7MT3|1|a|A|1189

Current chains

Chain a
16S rRNA

Nearby chains

Chain c
30S ribosomal protein S3
Chain e
30S ribosomal protein S5
Chain i
30S ribosomal protein S9
Chain j
30S ribosomal protein S10
Chain n
30S ribosomal protein S14 type Z

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.2606 s