IL_7MT3_164

3D structure

PDB id

7MT3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70S with P/E tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CAGC*GG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MT3_164 not in the Motif Atlas

Geometric match to IL_5J7L_052

Geometric discrepancy: 0.2013

The information below is about IL_5J7L_052

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_15052.4

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

8

Unit IDs

7MT3|1|a|C|1120
7MT3|1|a|A|1121
7MT3|1|a|G|1122
7MT3|1|a|C|1123
*
7MT3|1|a|G|1134
7MT3|1|a|G|1135

Current chains

Chain a

16S rRNA

Nearby chains

Chain i

30S ribosomal protein S9