IL_7MT3_187

3D structure

PDB id

7MT3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70S with P/E tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGAACUCGG*CUGUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MT3_187 not in the Motif Atlas

Homologous match to IL_4WF9_117

Geometric discrepancy: 0.0786

The information below is about IL_4WF9_117

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22854.4

Basepair signature

cWW-tSH-cWW-tHW-R-L-cWW-L-L-R

Number of instances in this motif group

7

Unit IDs

7MT3|1|A|G|1901
7MT3|1|A|G|1902
7MT3|1|A|A|1903
7MT3|1|A|A|1904
7MT3|1|A|C|1905
7MT3|1|A|U|1906
7MT3|1|A|C|1907
7MT3|1|A|G|1908
7MT3|1|A|G|1909
*
7MT3|1|A|C|2228
7MT3|1|A|U|2229
7MT3|1|A|G|2230
7MT3|1|A|U|2231
7MT3|1|A|C|2232

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain K

50S ribosomal protein L14