IL_7MT7_050

3D structure

PDB id

7MT7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70S with P and E site tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

2.71 Å

Loop

Sequence

CGAGG*CGUAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MT7_050 not in the Motif Atlas

Homologous match to IL_5J7L_293

Geometric discrepancy: 0.0888

The information below is about IL_5J7L_293

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_17136.7

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

14

Unit IDs

7MT7|1|A|C|1488
7MT7|1|A|G|1489
7MT7|1|A|A|1490
7MT7|1|A|G|1491
7MT7|1|A|G|1492
*
7MT7|1|A|C|1501
7MT7|1|A|G|1502
7MT7|1|A|U|1503
7MT7|1|A|A|1504
7MT7|1|A|G|1505

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain C

50S ribosomal protein L2

Chain X

50S ribosomal protein L28