IL_7MT7_136

3D structure

PDB id

7MT7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70S with P and E site tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

2.71 Å

Loop

Sequence

GUC*GAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MT7_136 not in the Motif Atlas

Geometric match to IL_4KNQ_004

Geometric discrepancy: 0.2051

The information below is about IL_4KNQ_004

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_44258.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

259

Unit IDs

7MT7|1|a|G|453
7MT7|1|a|U|454
7MT7|1|a|C|455
*
7MT7|1|a|G|468
7MT7|1|a|A|469
7MT7|1|a|U|470

Current chains

Chain a

16S rRNA

Nearby chains

Chain p

30S ribosomal protein S16