IL_7N1P_030

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GU*AUAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N1P_030 not in the Motif Atlas

Homologous match to IL_4LFB_025

Geometric discrepancy: 0.082

The information below is about IL_4LFB_025

Detailed Annotation

Major groove minor groove platform; mini C-loop

Broad Annotation

No text annotation

Motif group

IL_68140.4

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

18

Unit IDs

7N1P|1|16|G|597
7N1P|1|16|U|598
*
7N1P|1|16|A|640
7N1P|1|16|U|641
7N1P|1|16|A|642
7N1P|1|16|C|643

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SH

30S ribosomal protein S8

Chain SQ

30S ribosomal protein S17