IL_7N1P_048
3D structure
- PDB id
- 7N1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.33 Å
Loop
- Sequence
- UGCAU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 7N1P|1|16|C|1054
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7N1P_048 not in the Motif Atlas
- Geometric match to IL_4LFB_044
- Geometric discrepancy: 0.0681
- The information below is about IL_4LFB_044
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_82453.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
7N1P|1|16|U|1052
7N1P|1|16|G|1053
7N1P|1|16|C|1054
7N1P|1|16|A|1055
7N1P|1|16|U|1056
*
7N1P|1|16|A|1204
7N1P|1|16|U|1205
7N1P|1|16|G|1206
Current chains
- Chain 16
- 16S rRNA
Nearby chains
- Chain Pt
- Transfer RNA; tRNA
- Chain SC
- 30S ribosomal protein S3
- Chain SJ
- 30S ribosomal protein S10
- Chain SN
- 30S ribosomal protein S14
- Chain mR
- mRNA
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