IL_7N1P_061

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GU(5MC)AC*GAAGUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: 5MC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N1P_061 not in the Motif Atlas

Homologous match to IL_4LFB_058

Geometric discrepancy: 0.2264

The information below is about IL_4LFB_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7N1P|1|16|G|1405
7N1P|1|16|U|1406
7N1P|1|16|5MC|1407
7N1P|1|16|A|1408
7N1P|1|16|C|1409
*
7N1P|1|16|G|1491
7N1P|1|16|A|1492
7N1P|1|16|A|1493
7N1P|1|16|G|1494
7N1P|1|16|U|1495
7N1P|1|16|C|1496

Current chains

Chain 16

16S rRNA

Nearby chains

Chain 23

Large subunit ribosomal RNA; LSU rRNA

Chain Pt

Transfer RNA; tRNA

Chain SL

30S ribosomal protein S12

Chain mR

mRNA