IL_7N1P_085

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N1P_085 not in the Motif Atlas

Homologous match to IL_4WF9_024

Geometric discrepancy: 0.0665

The information below is about IL_4WF9_024

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_15190.1

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

22

Unit IDs

7N1P|1|23|U|703
7N1P|1|23|G|704
7N1P|1|23|A|705
7N1P|1|23|A|706
7N1P|1|23|G|707
*
7N1P|1|23|U|724
7N1P|1|23|G|725
7N1P|1|23|G|726
7N1P|1|23|A|727
7N1P|1|23|G|728

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LB

50S ribosomal protein L2