IL_7N1P_130

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CGUAAC*GGAGAAG

Length

13 nucleotides

Bulged bases

7N1P|1|23|G|1699

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N1P_130 not in the Motif Atlas

Geometric match to IL_5J7L_308

Geometric discrepancy: 0.0457

The information below is about IL_5J7L_308

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_47346.2

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

7

Unit IDs

7N1P|1|23|C|1686
7N1P|1|23|G|1687
7N1P|1|23|U|1688
7N1P|1|23|A|1689
7N1P|1|23|A|1690
7N1P|1|23|C|1691
*
7N1P|1|23|G|1696
7N1P|1|23|G|1697
7N1P|1|23|A|1698
7N1P|1|23|G|1699
7N1P|1|23|A|1700
7N1P|1|23|A|1701
7N1P|1|23|G|1702

Current chains

Chain 23

23S rRNA

Nearby chains

Chain 16

Small subunit ribosomal RNA; SSU rRNA

Chain LB

50S ribosomal protein L2