IL_7N1P_143

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

ACG*CUAU

Length

7 nucleotides

Bulged bases

7N1P|1|23|C|2055, 7N1P|1|23|U|2613, 7N1P|1|23|A|2614

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N1P_143 not in the Motif Atlas

Homologous match to IL_5J7L_321

Geometric discrepancy: 0.0691

The information below is about IL_5J7L_321

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_83389.2

Basepair signature

cWW-cWW

Number of instances in this motif group

5

Unit IDs

7N1P|1|23|A|2054
7N1P|1|23|C|2055
7N1P|1|23|G|2056
*
7N1P|1|23|C|2612
7N1P|1|23|U|2613
7N1P|1|23|A|2614
7N1P|1|23|U|2615

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LC

50S ribosomal protein L3

Chain LV

50S ribosomal protein L22

Chain Lf

50S ribosomal protein L32