IL_7N1P_146

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

AA*UACU

Length

6 nucleotides

Bulged bases

7N1P|1|23|A|2439

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N1P_146 not in the Motif Atlas

Homologous match to IL_5J7L_324

Geometric discrepancy: 0.0627

The information below is about IL_5J7L_324

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_51454.3

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

45

Unit IDs

7N1P|1|23|A|2070
7N1P|1|23|A|2071
*
7N1P|1|23|U|2438
7N1P|1|23|A|2439
7N1P|1|23|C|2440
7N1P|1|23|U|2441

Current chains

Chain 23

23S rRNA

Nearby chains

Chain Dt

Transfer RNA; tRNA

Chain LB

50S ribosomal protein L2

Chain Pp

Chains: Pp