3D structure

PDB id
7N1P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
2.33 Å

Loop

Sequence
CG*CAG
Length
5 nucleotides
Bulged bases
7N1P|1|23|A|2602
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7N1P_167 not in the Motif Atlas
Homologous match to IL_7RQB_101
Geometric discrepancy: 0.0611
The information below is about IL_7RQB_101
Detailed Annotation
Single bulged A
Broad Annotation
No text annotation
Motif group
IL_37497.6
Basepair signature
cWW-L-cWW
Number of instances in this motif group
118

Unit IDs

7N1P|1|23|C|2591
7N1P|1|23|G|2592
*
7N1P|1|23|C|2601
7N1P|1|23|A|2602
7N1P|1|23|G|2603

Current chains

Chain 23
23S rRNA

Nearby chains

Chain Dt
Transfer RNA; tRNA
Chain LB
50S ribosomal protein L2
Chain La
50S ribosomal protein L27
Chain Pp
Chains: Pp
Chain Pt
Transfer RNA; tRNA

Coloring options:


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