IL_7N1P_174

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CUGAAG*CGUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N1P_174 not in the Motif Atlas

Homologous match to IL_5J7L_351

Geometric discrepancy: 0.0778

The information below is about IL_5J7L_351

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_29471.1

Basepair signature

cWW-cWW-L-tHS-L-cWW

Number of instances in this motif group

1

Unit IDs

7N1P|1|23|C|2806
7N1P|1|23|U|2807
7N1P|1|23|G|2808
7N1P|1|23|A|2809
7N1P|1|23|A|2810
7N1P|1|23|G|2811
*
7N1P|1|23|C|2889
7N1P|1|23|G|2890
7N1P|1|23|U|2891
7N1P|1|23|G|2892

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LC

50S ribosomal protein L3

Chain LV

50S ribosomal protein L22

Chain Lf

50S ribosomal protein L32