IL_7N2U_020

3D structure

PDB id

7N2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

UGAAGAAG*UGUAAAG

Length

15 nucleotides

Bulged bases

7N2U|1|16|A|412

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N2U_020 not in the Motif Atlas

Homologous match to IL_4LFB_017

Geometric discrepancy: 0.1496

The information below is about IL_4LFB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28026.3

Basepair signature

cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW

Number of instances in this motif group

2

Unit IDs

7N2U|1|16|U|409
7N2U|1|16|G|410
7N2U|1|16|A|411
7N2U|1|16|A|412
7N2U|1|16|G|413
7N2U|1|16|A|414
7N2U|1|16|A|415
7N2U|1|16|G|416
*
7N2U|1|16|U|427
7N2U|1|16|G|428
7N2U|1|16|U|429
7N2U|1|16|A|430
7N2U|1|16|A|431
7N2U|1|16|A|432
7N2U|1|16|G|433

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SD

30S ribosomal protein S4