IL_7N2U_026

3D structure

PDB id

7N2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

CGUAAAG*CG

Length

9 nucleotides

Bulged bases

7N2U|1|16|A|572

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N2U_026 not in the Motif Atlas

Homologous match to IL_5J7L_026

Geometric discrepancy: 0.0819

The information below is about IL_5J7L_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38186.6

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

4

Unit IDs

7N2U|1|16|C|569
7N2U|1|16|G|570
7N2U|1|16|U|571
7N2U|1|16|A|572
7N2U|1|16|A|573
7N2U|1|16|A|574
7N2U|1|16|G|575
*
7N2U|1|16|C|880
7N2U|1|16|G|881

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SL

30S ribosomal protein S12

Chain SQ

30S ribosomal protein S17