IL_7N2U_039

3D structure

PDB id

7N2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

GA*UAC

Length

5 nucleotides

Bulged bases

7N2U|1|16|A|1394

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N2U_039 not in the Motif Atlas

Homologous match to IL_4LFB_035

Geometric discrepancy: 0.0634

The information below is about IL_4LFB_035

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

134

Unit IDs

7N2U|1|16|G|922
7N2U|1|16|A|923
*
7N2U|1|16|U|1393
7N2U|1|16|A|1394
7N2U|1|16|C|1395

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SE

30S ribosomal protein S5