3D structure

PDB id
7N2U (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
2.53 Å

Loop

Sequence
UG*CAA
Length
5 nucleotides
Bulged bases
7N2U|1|16|A|1196
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7N2U_049 not in the Motif Atlas
Homologous match to IL_5J7L_049
Geometric discrepancy: 0.0938
The information below is about IL_5J7L_049
Detailed Annotation
Single bulged A
Broad Annotation
No text annotation
Motif group
IL_31462.7
Basepair signature
cWW-L-cWW
Number of instances in this motif group
132

Unit IDs

7N2U|1|16|U|1060
7N2U|1|16|G|1061
*
7N2U|1|16|C|1195
7N2U|1|16|A|1196
7N2U|1|16|A|1197

Current chains

Chain 16
16S rRNA

Nearby chains

Chain Pt
Transfer RNA; tRNA
Chain SC
30S ribosomal protein S3
Chain SE
30S ribosomal protein S5
Chain SJ
30S ribosomal protein S10
Chain SN
30S ribosomal protein S14
Chain mR
mRNA

Coloring options:


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