IL_7N2U_076

3D structure

PDB id

7N2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

GAAC*GAGUGAAAAAGAAC

Length

18 nucleotides

Bulged bases

7N2U|1|23|A|504, 7N2U|1|23|A|508

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N2U_076 not in the Motif Atlas

Geometric match to IL_5J7L_255

Geometric discrepancy: 0.0536

The information below is about IL_5J7L_255

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_81516.2

Basepair signature

cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L

Number of instances in this motif group

6

Unit IDs

7N2U|1|23|G|481
7N2U|1|23|A|482
7N2U|1|23|A|483
7N2U|1|23|C|484
*
7N2U|1|23|G|496
7N2U|1|23|A|497
7N2U|1|23|G|498
7N2U|1|23|U|499
7N2U|1|23|G|500
7N2U|1|23|A|501
7N2U|1|23|A|502
7N2U|1|23|A|503
7N2U|1|23|A|504
7N2U|1|23|A|505
7N2U|1|23|G|506
7N2U|1|23|A|507
7N2U|1|23|A|508
7N2U|1|23|C|509

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LV

50S ribosomal protein L22

Chain LX

50S ribosomal protein L24