IL_7N2V_072

3D structure

PDB id

7N2V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

CAG*CGAUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N2V_072 not in the Motif Atlas

Homologous match to IL_5J7L_252

Geometric discrepancy: 0.1653

The information below is about IL_5J7L_252

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47972.1

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

1

Unit IDs

7N2V|1|23|C|269
7N2V|1|23|A|270
7N2V|1|23|G|271
*
7N2V|1|23|C|366
7N2V|1|23|G|367
7N2V|1|23|A|368
7N2V|1|23|U|369
7N2V|1|23|G|370

Current chains

Chain 23

23S rRNA

Nearby chains

Chain Lb

50S ribosomal protein L28