IL_7N2V_137

3D structure

PDB id

7N2V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

UUAG*CGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N2V_137 not in the Motif Atlas

Homologous match to IL_5J7L_317

Geometric discrepancy: 0.1409

The information below is about IL_5J7L_317

Detailed Annotation

UAA/GAN related

Broad Annotation

No text annotation

Motif group

IL_77691.5

Basepair signature

cWW-tSH-L-R-L-cWW

Number of instances in this motif group

7

Unit IDs

7N2V|1|23|U|1864
7N2V|1|23|U|1865
7N2V|1|23|A|1866
7N2V|1|23|G|1867
*
7N2V|1|23|C|1874
7N2V|1|23|G|1875
7N2V|1|23|A|1876
7N2V|1|23|A|1877
7N2V|1|23|G|1878

Current chains

Chain 23

23S rRNA

Nearby chains