IL_7N2V_155

3D structure

PDB id

7N2V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

UUC*GG

Length

5 nucleotides

Bulged bases

7N2V|1|23|U|2402

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N2V_155 not in the Motif Atlas

Geometric match to IL_6UFH_004

Geometric discrepancy: 0.1688

The information below is about IL_6UFH_004

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_97561.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

147

Unit IDs

7N2V|1|23|U|2401
7N2V|1|23|U|2402
7N2V|1|23|C|2403
*
7N2V|1|23|G|2414
7N2V|1|23|G|2415

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LO

50S ribosomal protein L15

Chain Lg

50S ribosomal protein L33

Chain Li

50S ribosomal protein L35