3D structure

PDB id
7N31 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating 70S ribosome complex in a post-translocation (POST) conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
2.69 Å

Loop

Sequence
GGAACUG*CUAAGUAC
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7N31_071 not in the Motif Atlas
Homologous match to IL_5J7L_250
Geometric discrepancy: 0.04
The information below is about IL_5J7L_250
Detailed Annotation
8x7 Sarcin-Ricin; G-bulge
Broad Annotation
Sarcin-Ricin; G-bulge
Motif group
IL_04346.10
Basepair signature
cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
Number of instances in this motif group
15

Unit IDs

7N31|1|23|G|188
7N31|1|23|G|189
7N31|1|23|A|190
7N31|1|23|A|191
7N31|1|23|C|192
7N31|1|23|U|193
7N31|1|23|G|194
*
7N31|1|23|C|201
7N31|1|23|U|202
7N31|1|23|A|203
7N31|1|23|A|204
7N31|1|23|G|205
7N31|1|23|U|206
7N31|1|23|A|207
7N31|1|23|C|208

Current chains

Chain 23
23S rRNA

Nearby chains

Chain LO
50S ribosomal protein L15
Chain Lb
50S ribosomal protein L28
Chain Li
50S ribosomal protein L35

Coloring options:


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