3D structure

PDB id
7N31 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating 70S ribosome complex in a post-translocation (POST) conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
2.69 Å

Loop

Sequence
GGGAAAC*GGAAGAUGUAACGGGGC
Length
24 nucleotides
Bulged bases
7N31|1|23|A|1127, 7N31|1|23|U|1130
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7N31_101 not in the Motif Atlas
Geometric match to IL_5J7L_281
Geometric discrepancy: 0.0614
The information below is about IL_5J7L_281
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_50715.3
Basepair signature
cWW-tSH-tHH-L-R-L-R-L-tWW-L-cWW-L-L-L-R-L
Number of instances in this motif group
4

Unit IDs

7N31|1|23|G|1024
7N31|1|23|G|1025
7N31|1|23|G|1026
7N31|1|23|A|1027
7N31|1|23|A|1028
7N31|1|23|A|1029
7N31|1|23|C|1030
*
7N31|1|23|G|1124
7N31|1|23|G|1125
7N31|1|23|A|1126
7N31|1|23|A|1127
7N31|1|23|G|1128
7N31|1|23|A|1129
7N31|1|23|U|1130
7N31|1|23|G|1131
7N31|1|23|U|1132
7N31|1|23|A|1133
7N31|1|23|A|1134
7N31|1|23|C|1135
7N31|1|23|G|1136
7N31|1|23|G|1137
7N31|1|23|G|1138
7N31|1|23|G|1139
7N31|1|23|C|1140

Current chains

Chain 23
23S rRNA

Nearby chains

Chain LC
50S ribosomal protein L3
Chain LM
50S ribosomal protein L13
Chain LP
50S ribosomal protein L16
Chain Lj
50S ribosomal protein L36

Coloring options:


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