IL_7N8B_113
3D structure
- PDB id
- 7N8B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cycloheximide bound vacant 80S structure isolated from cbf5-D95A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.05 Å
Loop
- Sequence
- UA*UAAG
- Length
- 6 nucleotides
- Bulged bases
- 7N8B|1|A1|A|2911
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7N8B_113 not in the Motif Atlas
- Geometric match to IL_5TBW_111
- Geometric discrepancy: 0.1376
- The information below is about IL_5TBW_111
- Detailed Annotation
- Major groove platform with intercalation
- Broad Annotation
- Major groove platform
- Motif group
- IL_95601.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 9
Unit IDs
7N8B|1|A1|U|2891
7N8B|1|A1|A|2892
*
7N8B|1|A1|U|2909
7N8B|1|A1|A|2910
7N8B|1|A1|A|2911
7N8B|1|A1|G|2912
Current chains
- Chain A1
- 25S
Nearby chains
- Chain AB
- 60S ribosomal protein L3
- Chain AH
- 60S ribosomal protein L9-A
- Chain AO
- 60S ribosomal protein L16-A
- Chain Am
- 60S ribosomal protein L40-A
Coloring options: