IL_7N8B_185

3D structure

PDB id

7N8B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cycloheximide bound vacant 80S structure isolated from cbf5-D95A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

GGCCGGUC*GGAUUUCC

Length

16 nucleotides

Bulged bases

7N8B|1|B5|U|657, 7N8B|1|B5|G|677, 7N8B|1|B5|U|681

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7N8B|1|B5|G|651
7N8B|1|B5|G|652
7N8B|1|B5|C|653
7N8B|1|B5|C|654
7N8B|1|B5|G|655
7N8B|1|B5|G|656
7N8B|1|B5|U|657
7N8B|1|B5|C|658
*
7N8B|1|B5|G|676
7N8B|1|B5|G|677
7N8B|1|B5|A|678
7N8B|1|B5|U|679
7N8B|1|B5|U|680
7N8B|1|B5|U|681
7N8B|1|B5|C|682
7N8B|1|B5|C|683

Current chains

Chain B5

18S RIBOSOMAL RNA

Nearby chains

Chain BJ

40S ribosomal protein S9-A