IL_7N8B_203
3D structure
- PDB id
- 7N8B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cycloheximide bound vacant 80S structure isolated from cbf5-D95A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.05 Å
Loop
- Sequence
- GUG*CC
- Length
- 5 nucleotides
- Bulged bases
- 7N8B|1|B5|U|1052
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7N8B_203 not in the Motif Atlas
- Geometric match to IL_5J7L_017
- Geometric discrepancy: 0.2722
- The information below is about IL_5J7L_017
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 117
Unit IDs
7N8B|1|B5|G|1051
7N8B|1|B5|U|1052
7N8B|1|B5|G|1053
*
7N8B|1|B5|C|1066
7N8B|1|B5|C|1067
Current chains
- Chain B5
- 18S RIBOSOMAL RNA
Nearby chains
- Chain BA
- 40S ribosomal protein S0-A
- Chain BB
- 40S ribosomal protein S1-A
- Chain BR
- 40S ribosomal protein S17-A
- Chain Bb
- 40S ribosomal protein S27-A
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