IL_7N8B_219

3D structure

PDB id

7N8B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cycloheximide bound vacant 80S structure isolated from cbf5-D95A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

AAAUA*UUCUU

Length

10 nucleotides

Bulged bases

7N8B|1|B5|A|1346, 7N8B|1|B5|U|1347

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7N8B|1|B5|A|1344
7N8B|1|B5|A|1345
7N8B|1|B5|A|1346
7N8B|1|B5|U|1347
7N8B|1|B5|A|1348
*
7N8B|1|B5|U|1377
7N8B|1|B5|U|1378
7N8B|1|B5|C|1379
7N8B|1|B5|U|1380
7N8B|1|B5|U|1381

Current chains

Chain B5

18S RIBOSOMAL RNA

Nearby chains

Chain BQ

40S ribosomal protein S16-A

Chain BU

40S ribosomal protein S20