3D structure

PDB id
7NAT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Bacterial 30S ribosomal subunit assembly complex state A (Consensus refinement)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.59 Å

Loop

Sequence
GGAGG*CGUUAC
Length
11 nucleotides
Bulged bases
7NAT|1|A|U|485
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7NAT_022 not in the Motif Atlas
Geometric match to IL_5J7L_022
Geometric discrepancy: 0.1051
The information below is about IL_5J7L_022
Detailed Annotation
tSH-tHW-tWW
Broad Annotation
No text annotation
Motif group
IL_88269.4
Basepair signature
cWW-tWW-cSH-tWH-tHS-cWW
Number of instances in this motif group
3

Unit IDs

7NAT|1|A|G|446
7NAT|1|A|G|447
7NAT|1|A|A|448
7NAT|1|A|G|449
7NAT|1|A|G|450
*
7NAT|1|A|C|483
7NAT|1|A|G|484
7NAT|1|A|U|485
7NAT|1|A|U|486
7NAT|1|A|A|487
7NAT|1|A|C|488

Current chains

Chain A
16S rRNA

Nearby chains

Chain D
30S ribosomal protein S4
Chain P
30S ribosomal protein S16

Coloring options:


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