3D structure

PDB id
7NAX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Complete Bacterial 30S ribosomal subunit assembly complex state I (Consensus Refinement)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.96 Å

Loop

Sequence
CAAAC*GGUAG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7NAX_037 not in the Motif Atlas
Homologous match to IL_5J7L_037
Geometric discrepancy: 0.0745
The information below is about IL_5J7L_037
Detailed Annotation
tSH-tHW-tHS
Broad Annotation
No text annotation
Motif group
IL_17136.7
Basepair signature
cWW-tSH-tHW-tHS-cWW
Number of instances in this motif group
14

Unit IDs

7NAX|1|A|C|779
7NAX|1|A|A|780
7NAX|1|A|A|781
7NAX|1|A|A|782
7NAX|1|A|C|783
*
7NAX|1|A|G|799
7NAX|1|A|G|800
7NAX|1|A|U|801
7NAX|1|A|A|802
7NAX|1|A|G|803

Current chains

Chain A
16S rRNA

Nearby chains

Chain K
30S ribosomal protein S11

Coloring options:


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