IL_7NAX_046

3D structure

PDB id

7NAX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complete Bacterial 30S ribosomal subunit assembly complex state I (Consensus Refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

UGCAU*AUG

Length

8 nucleotides

Bulged bases

7NAX|1|A|C|1054

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NAX_046 not in the Motif Atlas

Homologous match to IL_4LFB_044

Geometric discrepancy: 0.069

The information below is about IL_4LFB_044

Detailed Annotation

Isolated cWS basepair

Broad Annotation

No text annotation

Motif group

IL_82453.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

5

Unit IDs

7NAX|1|A|U|1052
7NAX|1|A|G|1053
7NAX|1|A|C|1054
7NAX|1|A|A|1055
7NAX|1|A|U|1056
*
7NAX|1|A|A|1204
7NAX|1|A|U|1205
7NAX|1|A|G|1206

Current chains

Chain A

16S rRNA

Nearby chains

Chain C

30S ribosomal protein S3

Chain J

30S ribosomal protein S10

Chain N

30S ribosomal protein S14