IL_7NBU_080
3D structure
- PDB id
- 7NBU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955) and its target, the cspA mRNA, on the E. coli Ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- GGAG*UGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NBU_080 not in the Motif Atlas
- Homologous match to IL_5J7L_256
- Geometric discrepancy: 0.1095
- The information below is about IL_5J7L_256
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.15
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 34
Unit IDs
7NBU|1|a|G|536
7NBU|1|a|G|537
7NBU|1|a|A|538
7NBU|1|a|G|539
*
7NBU|1|a|U|554
7NBU|1|a|G|555
7NBU|1|a|A|556
7NBU|1|a|C|557
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain i
- 50S ribosomal protein L13
- Chain p
- 50S ribosomal protein L20
Coloring options: