IL_7NBU_106

3D structure

PDB id

7NBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955) and its target, the cspA mRNA, on the E. coli Ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

CCCAGACAGC*GUCGAG

Length

16 nucleotides

Bulged bases

7NBU|1|a|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NBU|1|a|C|1043
7NBU|1|a|C|1044
7NBU|1|a|C|1045
7NBU|1|a|A|1046
7NBU|1|a|G|1047
7NBU|1|a|A|1048
7NBU|1|a|C|1049
7NBU|1|a|A|1050
7NBU|1|a|G|1051
7NBU|1|a|C|1052
*
7NBU|1|a|G|1107
7NBU|1|a|U|1108
7NBU|1|a|C|1109
7NBU|1|a|G|1110
7NBU|1|a|A|1111
7NBU|1|a|G|1112

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L36

Chain g

50S ribosomal protein L6